As I was in the coding mood from my changes last night to my website/blog, I took the next logical step and completely overhauled the entire theme. After heavily modifying a theme I think I have the general look I am wanting.
Some of the notable changes include:
Everything should be in place, if anyone notices some stray PHP code or CSS trying to escape, please let me know so I can put it in its place.
After what has been far too long, I finally took the time to convert my site to using WordPress for all content. Previously I had wanted to have custom PHP run the main site and use WordPress only for the blogging, however, time never seemed to allow me to finish the normal site.
Things still on my list of todo items: